List of files for genome data submission

  1. FASTA file of assembled sequences
  2. FASTA file of assembled sequences repeat masked
  3. GFF3 files that map scaffolds and pseudomodules or scaffolds and contigs
  1. GFF3 file of genes. 
  2. FASTA file for genes, mRNA (cDNA), CDS and proteins.   
  1. FASTA file of repeats  (for use as potential repeat library)
  2. GFF3 file of repeats against the assembly.  
Information on Assembly
  1. Software, source and date performed (see example)
  2. Materials and Methods: some text to describe assembly and annotation process
  3. Publication