RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1, RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1
Aliasss475876567
rs267609514
c475876567
SNP_AG_4428309_Lg16_182011__182011_exon1
AX-105187249
dbSNP IDss475876567
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCCTCGTCTAGGAACATACGAAAGATCAAAAATGTC
3' Flanking SequenceGACGGCGAAGTTAAAGCTGCCAAGCTGGTCGGCT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1 ID=RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1|Name=RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
CCTCGTCTAGGAACATACGAAAGATCAAAAATGTCRGACGGCGAAGTTAA
AGCTGCCAAGCTGGTCGGCT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A2.06RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1View
2Apple-M432-2013-physical-Malus-domestica16N/A4428309RosBREEDSNP_SNP_AG_4428309_Lg16_182011__182011_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC022898.198 contig MDC022898.198:21197..21197. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr16 chromosome Chr16:6508823..6508823. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr16 chromosome Chr16:6508822..6508822. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation