RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1, RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1
Aliasss475882159
rs267615104
b475882159
SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1
AX-105210532
dbSNP IDss475882159
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceATCTTGGTGTTGTCTTGTATGAGTATTTGGGAGAA
3' Flanking SequenceAGTATCCAGAAGTTTTGGGATCAATTCTGGGAGC
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1 ID=RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1|Name=RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
ATCTTGGTGTTGTCTTGTATGAGTATTTGGGAGAARAGTATCCAGAAGTT
TTGGGATCAATTCTGGGAGC
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A25.09RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1View
2Apple-M432-2013-physical-Malus-domestica17N/A16518610RosBREEDSNP_SNP_GA_16518610_Lg17_01438_MAF10_422235_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC016944.115 contig MDC016944.115:14724..14724. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr11 chromosome Chr11:2028753..2028753. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr17 chromosome Chr17:15981261..15981261. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr17 chromosome Chr17:16024642..16024642. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation