RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1, RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1
Aliasss475876797
rs267609744
c475876797
SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1
AX-105213550
dbSNP IDss475876797
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1
50K SNP array for apple:RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1
TypeSNP
SNP AllelesA/C
5' Flanking SequenceCCAATGAGAACAACCACCATGACAATGGTGAGGAC
3' Flanking SequenceGAGATCTTGTGCCAGTCCCTCTTGATATCTTCAA
SpeciesMalus x domestica
PolymorphismP_ RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1 ID=RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1|Name=RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
CCAATGAGAACAACCACCATGACAATGGTGAGGACMGAGATCTTGTGCCA
GTCCCTCTTGATATCTTCAA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A28.11RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1View
2Apple-M432-2013-physical-Malus-domestica1N/A18100633RosBREEDSNP_SNP_AC_18100633_Lg1_01783_MAF10_1654448_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC022772.171 contig MDC022772.171:4130..4130. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:22316325..22316325. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr01 chromosome Chr01:22316324..22316324. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation