RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1, RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1
Aliasss475876713
rs267609660
b475876713
SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1
AX-105220052
dbSNP IDss475876713
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1
50K SNP array for apple:RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCAGCATCAACAACATCAGCAGCAACAGCAACAGCA
3' Flanking SequenceCAGCAGCAGCAATTGGGGTCTAGACAGGTAATGA
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1 ID=RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1|Name=RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1|organism=Malus x domestica|type=genetic_marker|length=70bp
CAGCATCAACAACATCAGCAGCAACAGCAACAGCARCAGCAGCAGCAATT
GGGGTCTAGACAGGTAATGA
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A10.28RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1View
2Apple-M432-2013-physical-Malus-domestica1N/A12378938RosBREEDSNP_SNP_GA_12378938_Lg1_02334_MAF20_563983_exon1View
Alignments
Feature NameTypeLocationAnalysis
MDC022598.76 contig MDC022598.76:6697..6697. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:16965495..16965495. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation