RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3, RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3 (genetic_marker) Malus x domestica

Marker Overview
NameRosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3
Aliasss475876752
rs267609699
b475876752
SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3
AX-105203454
dbSNP IDss475876752
SNP Array ID
IRSC 9K SNP array for apple:RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3
50K SNP array for apple:RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3
TypeSNP
SNP AllelesA/G
5' Flanking SequenceCTTATTCTGACGACTCATTTTCATGCAGCCTTCAT
3' Flanking SequenceGGATGTCAAATTTGACGCCCTTTTCTCGACCAAT
SpeciesMalus x domestica
Publication[view all]
Libraries
Library NameType
IRSC 9K SNP array for appleSNP_chip
50K SNP array for appleSNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3Malus x domesticamarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Sequence
>RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3 ID=RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3|Name=RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3|organism=Malus x domestica|type=genetic_marker|length=70bp
CTTATTCTGACGACTCATTTTCATGCAGCCTTCATRGGATGTCAAATTTG
ACGCCCTTTTCTCGACCAAT
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Apple-M432-20131N/A20.19RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3View
2Apple-M432-2013-physical-Malus-domestica1N/A14755288RosBREEDSNP_SNP_AG_14755288_Lg1_01500_MAF40_MDP0000820420_exon3View
Alignments
Feature NameTypeLocationAnalysis
MDC027887.47 contig MDC027887.47:1596..1596. Malus x domestica Whole Genome v1.0 Assembly & Annotation
Chr01 chromosome Chr01:19076111..19076111. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation
Chr01 chromosome Chr01:19076109..19076109. Malus x domestica GDDH13 v1.1 Whole Genome Assembly & Annotation