RosBREED_snp_sweet_cherry_Pp1_05894052, RosBREED_snp_sweet_cherry_Pp1_05894052 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp1_05894052
AliasRosBREED_snp_sweet_1_05894052
ss490545852
rs271786356
Rsweet_1_05894052
dbSNP IDss490545852
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp1_05894052
TypeSNP
SNP AllelesA/C
SpeciesPrunus avium
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
ss490545852ss490545852Prunus aviummarker_locus
Rsweet_1_05894052Rsweet_1_05894052Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_05894052RosBREED_snp_sweet_cherry_Pp1_05894052Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_05894052RosBREED_snp_sweet_cherry_Pp1_05894052-13.53Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_05894052RosBREED_snp_sweet_cherry_Pp1_05894052-26.406Prunus aviummarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-BTK-Black Tartarian-2013LG01N/A21.9ss490545852View
2Sweet Cherry-RL-Lapins-2013LG01N/A11.2ss490545852View
3Sweet Cherry-BTK-F1-2013LG01N/A28.1ss490545852View
4Sweet Cherry-RL-F1-2013LG01N/A13.5ss490545852View
5Sweet Cherry-RG-F1-2015G1N/A14.08Rsweet_1_05894052View
6Sweet Cherry-RL-F1-2015L1N/A9.45Rsweet_1_05894052View
7Prunus-TE-6K cherry SNP-estimate1N/A9.61RosBREED_snp_sweet_cherry_Pp1_05894052View
8sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A26.08RosBREED_snp_sweet_cherry_Pp1_05894052View
9Sour Cherry-M172x25-F1LG1N/A13.53RosBREED_snp_sweet_cherry_Pp1_05894052View
10SourCherry-Montx25-F1LG1N/A13.53RosBREED_snp_sweet_cherry_Pp1_05894052View
11SourCherry-25x25-F1LG1N/A13.53RosBREED_snp_sweet_cherry_Pp1_05894052View
12Sour Cherry-US-F1LG1N/A13.53RosBREED_snp_sweet_cherry_Pp1_05894052View
13SourCherry-RE-F1LG1N/A13.53RosBREED_snp_sweet_cherry_Pp1_05894052View
14SweetCherry-FX-F1-FercerF1N/A26.41RosBREED_snp_sweet_cherry_Pp1_05894052View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:5894052..5894052. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:6343413..6343413. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:4802040..4802040. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)