RosBREED_snp_sweet_cherry_Pp1_05878432, RosBREED_snp_sweet_cherry_Pp1_05878432 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp1_05878432
AliasRosBREED_snp_sweet_1_05878432
ss490545848
rs271786355
Rsweet_1_05878432
dbSNP IDss490545848
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp1_05878432
TypeSNP
SNP AllelesT/C
SpeciesPrunus avium
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
ss490545848ss490545848Prunus aviummarker_locus
Rsweet_1_05878432Rsweet_1_05878432Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_05878432RosBREED_snp_sweet_cherry_Pp1_05878432Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_05878432RosBREED_snp_sweet_cherry_Pp1_05878432-14.869Prunus aviummarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-BTK-Black Tartarian-2013LG01N/A21.9ss490545848View
2Sweet Cherry-RL-Lapins-2013LG01N/A10.3ss490545848View
3Sweet Cherry-BTK-F1-2013LG01N/A28.1ss490545848View
4Sweet Cherry-RL-F1-2013LG01N/A12.7ss490545848View
5Sweet Cherry-RG-F1-2015G1N/A13.2Rsweet_1_05878432View
6Sweet Cherry-RL-F1-2015L1N/A8.61Rsweet_1_05878432View
7Prunus-TE-6K cherry SNP-estimate1N/A9.6RosBREED_snp_sweet_cherry_Pp1_05878432View
8sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A26RosBREED_snp_sweet_cherry_Pp1_05878432View
9Sweet Cherry-V-F1LG1N/A20.06RosBREED_snp_sweet_cherry_Pp1_05878432View
10Sweet Cherry-VxC-F1LG1N/A20.33RosBREED_snp_sweet_cherry_Pp1_05878432View
11Sweet Cherry-RL-F1-2014L1N/A12RosBREED_snp_sweet_cherry_Pp1_05878432View
12Sweet Cherry-V-F1-6+9K_array1N/A18.68RosBREED_snp_sweet_cherry_Pp1_05878432View
13Sweet Cherry-VxC-F1-6+9K_array1N/A23.81RosBREED_snp_sweet_cherry_Pp1_05878432View
14SweetCherry-FX-F1-XX1N/A14.87RosBREED_snp_sweet_cherry_Pp1_05878432View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:5878432..5878432. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:6327793..6327793. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)
PAV_r1.0chr1 chromosome PAV_r1.0chr1:4785619..4785619. Prunus avium Whole Genome Assembly v1.0 & Annotation v1 (v1.0.a1)