Pa2Cl_snp_sweet_cherry_Pp4_12750612, Pa2Cl_snp_sweet_cherry_Pp4_12750612 (genetic_marker) Prunus avium

Marker Overview
NamePa2Cl_snp_sweet_cherry_Pp4_12750612
AliasPa2Cl_snp_sweet_4_12750612
ss490545360
rs271786207
Pa1Cl_4_12750612
dbSNP IDss490545360
SNP Array ID
IRSC 6K SNP array for cherry:Pa2Cl_snp_sweet_cherry_Pp4_12750612
TypeSNP
SNP AllelesT/C
SpeciesPrunus avium
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Pa1Cl_4_12750612Pa1Cl_4_12750612Prunus aviummarker_locus
Pa2Cl_snp_sweet_cherry_Pp4_12750612Pa2Cl_snp_sweet_cherry_Pp4_12750612Prunus aviummarker_locus
ss490545360ss490545360Prunus aviummarker_locus
Pa2Cl_snp_sweet_cherry_Pp4_12750612Pa2Cl_snp_sweet_cherry_Pp4_12750612-34.13Prunus aviummarker_locus


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015R4N/A36.56Pa1Cl_4_12750612View
2Prunus-TE-6K cherry SNP-estimate4N/A42.61Pa2Cl_snp_sweet_cherry_Pp4_12750612View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate4N/A38.98Pa2Cl_snp_sweet_cherry_Pp4_12750612View
4Sweet Cherry-VxC-F1LG4N/A55.99Pa2Cl_snp_sweet_cherry_Pp4_12750612View
5Sweet Cherry-CxC-F2LG4N/A58.52Pa2Cl_snp_sweet_cherry_Pp4_12750612View
6Sweet Cherry-BCxBC-F2LG4N/A53.17Pa2Cl_snp_sweet_cherry_Pp4_12750612View
7Sweet Cherry-RG-F1-2014R4N/A38.9Pa2Cl_snp_sweet_cherry_Pp4_12750612View
8Sweet Cherry-VxC-F1-6+9K_array4N/A55.65Pa2Cl_snp_sweet_cherry_Pp4_12750612View
9Sweet Cherry-RL-F1-2013LG04N/A34.1ss490545360View
10Sour Cherry-US-F1LG4N/A34.13Pa2Cl_snp_sweet_cherry_Pp4_12750612View
11SourCherry-RE-F1LG4N/A34.13Pa2Cl_snp_sweet_cherry_Pp4_12750612View
Alignments
Feature NameTypeLocationAnalysis
scaffold_4 supercontig scaffold_4:12750435..12750435. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp04 chromosome Pp04:12761291..12761291. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)