RosBREED_snp_sweet_cherry_Pp1_08106269, RosBREED_snp_sweet_cherry_Pp1_08106269 (genetic_marker) Prunus avium

Marker Overview
NameRosBREED_snp_sweet_cherry_Pp1_08106269
AliasRosBREED_snp_sweet_1_08106269
ss490546044
rs271786403
Rsweet_1_08106269
dbSNP IDss490546044
SNP Array ID
IRSC 6K SNP array for cherry:RosBREED_snp_sweet_cherry_Pp1_08106269
TypeSNP
SNP AllelesA/C
SpeciesPrunus avium
Publication[view all]
Libraries
Library NameType
IRSC 6K SNP array for cherrySNP_chip
Relationships

The following marker_locus feature(s) are an instance of this genetic_marker:

Feature NameUnique NameSpeciesType
Rsweet_1_08106269Rsweet_1_08106269Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_08106269RosBREED_snp_sweet_cherry_Pp1_08106269Prunus aviummarker_locus
RosBREED_snp_sweet_cherry_Pp1_08106269RosBREED_snp_sweet_cherry_Pp1_08106269-20.63Prunus aviummarker_locus


The following haplotype_block feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
Pav-HB-01-6Pav-HB-01-6Prunus aviumhaplotype_block


The following haplotype feature(s) contains this genetic_marker:

Feature NameUnique NameSpeciesType
2Pav-HB-01-6_2Prunus aviumhaplotype
3Pav-HB-01-6_3Prunus aviumhaplotype
4Pav-HB-01-6_4Prunus aviumhaplotype
5Pav-HB-01-6_5Prunus aviumhaplotype
6Pav-HB-01-6_6Prunus aviumhaplotype
7Pav-HB-01-6_7Prunus aviumhaplotype
8Pav-HB-01-6_8Prunus aviumhaplotype
9Pav-HB-01-6_9Prunus aviumhaplotype
10Pav-HB-01-6_10Prunus aviumhaplotype
11Pav-HB-01-6_11Prunus aviumhaplotype
12Pav-HB-01-6_12Prunus aviumhaplotype
13Pav-HB-01-6_13Prunus aviumhaplotype
14Pav-HB-01-6_14Prunus aviumhaplotype
15Pav-HB-01-6_15Prunus aviumhaplotype
16Pav-HB-01-6_16Prunus aviumhaplotype
17Pav-HB-01-6_17Prunus aviumhaplotype
18Pav-HB-01-6_18Prunus aviumhaplotype
19Pav-HB-01-6_19Prunus aviumhaplotype
20Pav-HB-01-6_20Prunus aviumhaplotype
21Pav-HB-01-6_21Prunus aviumhaplotype
22Pav-HB-01-6_22Prunus aviumhaplotype
23Pav-HB-01-6_23Prunus aviumhaplotype
24Pav-HB-01-6_24Prunus aviumhaplotype
25Pav-HB-01-6_25Prunus aviumhaplotype
26Pav-HB-01-6_26Prunus aviumhaplotype
27Pav-HB-01-6_27Prunus aviumhaplotype
28Pav-HB-01-6_28Prunus aviumhaplotype
29Pav-HB-01-6_29Prunus aviumhaplotype
30Pav-HB-01-6_30Prunus aviumhaplotype
31Pav-HB-01-6_31Prunus aviumhaplotype
32Pav-HB-01-6_32Prunus aviumhaplotype
33Pav-HB-01-6_33Prunus aviumhaplotype
34Pav-HB-01-6_34Prunus aviumhaplotype
35Pav-HB-01-6_35Prunus aviumhaplotype
36Pav-HB-01-6_36Prunus aviumhaplotype
37Pav-HB-01-6_37Prunus aviumhaplotype
38Pav-HB-01-6_38Prunus aviumhaplotype
39Pav-HB-01-6_39Prunus aviumhaplotype
40Pav-HB-01-6_40Prunus aviumhaplotype
41Pav-HB-01-6_41Prunus aviumhaplotype
42Pav-HB-01-6_42Prunus aviumhaplotype
43Pav-HB-01-6_43Prunus aviumhaplotype
44Pav-HB-01-6_44Prunus aviumhaplotype
45Pav-HB-01-6_45Prunus aviumhaplotype
46Pav-HB-01-6_46Prunus aviumhaplotype
47Pav-HB-01-6_47Prunus aviumhaplotype
48Pav-HB-01-6_48Prunus aviumhaplotype
49Pav-HB-01-6_49Prunus aviumhaplotype
50Pav-HB-01-6_50Prunus aviumhaplotype
51Pav-HB-01-6_51Prunus aviumhaplotype
52Pav-HB-01-6_52Prunus aviumhaplotype
53Pav-HB-01-6_53Prunus aviumhaplotype
54Pav-HB-01-6_54Prunus aviumhaplotype
55Pav-HB-01-6_55Prunus aviumhaplotype
56Pav-HB-01-6_56Prunus aviumhaplotype
57Pav-HB-01-6_57Prunus aviumhaplotype
58Pav-HB-01-6_58Prunus aviumhaplotype
59Pav-HB-01-6_59Prunus aviumhaplotype
60Pav-HB-01-6_60Prunus aviumhaplotype
61Pav-HB-01-6_61Prunus aviumhaplotype
62Pav-HB-01-6_62Prunus aviumhaplotype
63Pav-HB-01-6_63Prunus aviumhaplotype
64Pav-HB-01-6_64Prunus aviumhaplotype
65Pav-HB-01-6_65Prunus aviumhaplotype
66Pav-HB-01-6_66Prunus aviumhaplotype
67Pav-HB-01-6_67Prunus aviumhaplotype
68Pav-HB-01-6_68Prunus aviumhaplotype
69Pav-HB-01-6_69Prunus aviumhaplotype
70Pav-HB-01-6_70Prunus aviumhaplotype
71Pav-HB-01-6_71Prunus aviumhaplotype
72Pav-HB-01-6_72Prunus aviumhaplotype
73Pav-HB-01-6_73Prunus aviumhaplotype
74Pav-HB-01-6_74Prunus aviumhaplotype


Analyses
This genetic_marker is derived from or has results from the following analyses
Analysis NameDate Performed
RosBREED SNP development2011-01-01
Alignment of IRSC 6K SNP array for cherry to Peach Genome v2.0.a12016-11-21
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Sweet Cherry-RG-F1-2015G1N/A20.31Rsweet_1_08106269View
2Prunus-TE-6K cherry SNP-estimate1N/A11.87RosBREED_snp_sweet_cherry_Pp1_08106269View
3sweet cherry-consensus-map-2012-6K cherry SNP-estimate1N/A36.94RosBREED_snp_sweet_cherry_Pp1_08106269View
4Sweet Cherry-BCxBC-F2LG1N/A21.36RosBREED_snp_sweet_cherry_Pp1_08106269View
5Sweet Cherry-RG-F1-2014G1N/A20.7RosBREED_snp_sweet_cherry_Pp1_08106269View
6Sweet Cherry-RosBREED-3.8K-20201N/A21.41RosBREED_snp_sweet_cherry_Pp1_08106269View
7Sweet Cherry-RosBREED-1.6K-20191N/A20.63RosBREED_snp_sweet_cherry_Pp1_08106269View
8Sour Cherry-M172x25-F1LG1N/A20.63RosBREED_snp_sweet_cherry_Pp1_08106269View
9SourCherry-Montx25-F1LG1N/A20.63RosBREED_snp_sweet_cherry_Pp1_08106269View
10SourCherry-25x25-F1LG1N/A20.63RosBREED_snp_sweet_cherry_Pp1_08106269View
11Sour Cherry-US-F1LG1N/A20.63RosBREED_snp_sweet_cherry_Pp1_08106269View
12SourCherry-RE-F1LG1N/A20.63RosBREED_snp_sweet_cherry_Pp1_08106269View
Alignments
Feature NameTypeLocationAnalysis
scaffold_1 supercontig scaffold_1:8106269..8106269. Prunus persica Whole Genome v1.0 Assembly & Annotation
Pp01 chromosome Pp01:8555629..8555629. Prunus persica Whole Genome Assembly v2.0 & Annotation v2.1 (v2.0.a1)