MDP0000464809, MDP0000464809 (mRNA) Malus spp. (apple)

Transcript Overview
NameMDP0000464809
Unique NameMDP0000464809
TypemRNA
OrganismMalus x domestica (Apple)
Sequence length4353
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA2012-07-23
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
MDP0000464809_exon_1MDP0000464809_exon_1Malus x domesticaCDS
MDP0000464809_exon_2MDP0000464809_exon_2Malus x domesticaCDS
MDP0000464809_exon_3MDP0000464809_exon_3Malus x domesticaCDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
MDP0000464809MDP0000464809Malus x domesticapolypeptide


InterPro
Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005202Transcription factor GRASPFAMPF03514GRAScoord: 575..951
score: 3.8e
IPR005202Transcription factor GRASPROFILEPS50985GRAScoord: 549..933
score: 54
IPR013094Alpha/beta hydrolase fold-3PFAMPF07859Abhydrolase_3coord: 132..372
score: 2.6
NoneNo IPR availableCOILcoilcoiled-coilcoord: 545..566
score
NoneNo IPR availableGENE3D3.40.50.1820no descriptioncoord: 120..396
score: 5.9
NoneNo IPR availablePANTHERPTHR23024FAMILY NOT NAMEDcoord: 45..399
score: 1.6
NoneNo IPR availablePANTHERPTHR23024:SF10CARBOXYLESTERASE-RELATEDcoord: 45..399
score: 1.6
NoneNo IPR availableSEGsegsegcoord: 560..572
score
NoneNo IPR availableSUPERFAMILY53474alpha/beta-Hydrolasescoord: 105..396
score: 7.8
NoneNo IPR availableSEGsegsegcoord: 14..60
score: NAcoord: 70..83
score
NoneNo IPR availableSEGsegsegcoord: 1..23
score
NoneNo IPR availableSEGsegsegcoord: 54..76
score
NoneNo IPR availableSEGsegsegcoord: 34..50
score
NoneNo IPR availableSEGsegsegcoord: 16..24
score: NAcoord: 44..60
score
NoneNo IPR availableSEGsegsegcoord: 108..125
score
NoneNo IPR availableSEGsegsegcoord: 33..49
score: NAcoord: 57..67
score: NAcoord: 69..77
score
NoneNo IPR availableSEGsegsegcoord: 4..34
score
NoneNo IPR availableSEGsegsegcoord: 12..21
score: NAcoord: 30..45
score
NoneNo IPR availableSEGsegsegcoord: 21..36
score: NAcoord: 38..50
score

Sequences
The following sequences are available for this feature:

mRNA sequence

>MDP0000464809 ID=MDP0000464809; Name=MDP0000464809; organism=Malus x domestica; type=mRNA; length=4353bp
ATGCCACCCCTAAGTTTGAAGCTKCACAGCTTGTTCTTCAAGTACCATCT
CAGACACCAATTACACAACCTAACCCAATCAGCGCAACTCCAAAACACAG
ACCCGAAATTTGGCATCACTTCCCGCCCCGAAGAGCCCGTCGTTCCCGCC
AACCCCACTTTCCAAAACGGCGTCGCCACCAAAAACATMCACATCGACCC
CAACTCCTCCCTCTCCCTCCGCATCTTCTTACCTGACACCGTCCTCCCCC
TCAAAGCACCAAATCCCACGTCTCGTGTCGGCGCCCTGTTGTCTCCCTCC
CCTGYCTGCTCTAACTCCGACGATGGTGTCGTGTACAGGGGATATTCTCC
CGATCAGTTAGTGGGGAGGCGACACCGGAAGGTTCCGATATTTTTGCAGT
TTCACGGAGGTGGGTTTGTGAGCGGGAGCAACGACACGTCGTGGAACGAC
GCGTTCTGCAGGAGGATGGCGAAGCTGTGTGACGCGATCGTGGTGGCGGT
GGGGTATAGGCTGGCGCCGGAGAGTCCGTACCCAGCGGCGTTTGAGGACG
GGGTTACGGTGTTGAAGTGGGTAGCAAAGCAGGCCAACTTGGCCTTGGTT
CAAAAGGGACGGAGTCGTATCTTTGACAGCTTTGGGTCTTCGATGGTTGA
GCCATGGTTGGCTGCTCATGGAGATCCATCTAGGTACTTACTGCCTATCA
GCCATATCCGGATTGTTTAATTAGTATAATTAGTGTTGGTATATCATATA
TGCACAAATGGACCCTGTACAAAACTTTCATTGAAATAGATAAATTATGG
TTTAGTGCTCCTTTATTATTGTTTAGTATATTCTATTTTTTATTATTAAG
TTGATGGATGGATAAAATTGGAACAATCACAGAAGGTTCGCAAAAGTTTA
TGCAGTTCACTCAACAAAATTCAAATCGTGGGGTATTTAGATCGTATACA
TAGAACTAGTGACACTAAAATAACAATGCGATTTATATAGATTAGGGTTT
AATGTCTTTTATTATTTAGTTAATTTATGTTTATGCTTTTTAATTAAAAT
TTGTAACATGTTCTATTTGTGCATAGTTTTTGTGTGTATATTCTTGGATT
TTGAACTAACCAGTTGGGTTCCCAAAATTTAAAGTACATGGATTTGCTTA
ATGATTAGTGTTTTGATTATGTTCAGCCCTTTTTAGTTTGTACACCTTTT
GTTTAAATTCAGTAACTAATGAACATTAACATGTTATTTTCTTATCAGAA
CAGATGTGTACTTCTTGGAGTGAGCTGTGGAGCTAACTTGGCAGACTATG
TCGCTCGGAAGGCTGTGGAGGCAGGCGACCTCTTGGACCCGATAAAGGTG
GTAGCACAAGTACTAATGTACCCCTTTTTCATTGGAAGCACTCCCACCAG
GTCTGAGATTAAGCTAGCCAACTCCTACTTATTCGACAAGGCTACGTGTA
TGCTAGCATGGAAGCTATTTCAAACAGAGGAAGAGTTTGATTTAGACCAT
CCCGCCGGCAACCCCCTCATGCCTGCAGGGAGAGGGCCACCCTTAAAGAC
CATGCCTCCGACACTTACAGTTGTCGCGCAGCATGATTGGATGCGCGATC
GTGGCATTGCTTACTCCGAAGAATTGAGGAAGGCTAATGTRGATGCACCT
CTTTTAGATTACAAGGATACTGTGCACGAGTTTGCTACTCTTGATGTGCT
CCTTGAGACGCCCCAGGCCAAGGCTTGTGCAGAGGATATCACTATATGGG
TCAAGAAGTATATATCACTCAGAGGCCATGAGTTTTCTTATTGATTGTGA
ATATGTGATAAGTTCCGAAGTTGTTCAAATTGAAGCACATATGAACATGC
ATTTGAACAGCTTCGGGACAACGAAAGTGAACATTTTTGTGTACAAAATC
ATGTCAGTTCAAATTTTTTTACATAGTTTTCATCAGATTAGTTTTGAGAT
ATCTGATCCTTATTGAGCTGTGCATTGCACCCTGCAAACATATTTTGTTT
TGTTCTTTTGGAGTTGTTGGCCGCAGTCCATTTAGCTCCAAGATTGTCTC
CATACCGGTGGTATATCCTATACATGTTCTCTTGCTCTTATGCATTTTAG
AGCCTGGATAAATTAATTGTCCATGACAGCATCACCTACGCAGGTCGGCT
ATAAGCTTAATTGATTAACAGAATTTACCCCTGCTAAAGCGCTAACTATT
CCAGGCCATATGTGTTATTTTAAACCATGTCAGGATCCGGCGGACTTAGT
AAAAGGAAGAGGCGAAAAGAATAAGTTTTATAACCGAAAGTAGCATTGGA
GAATTCTGTATTTGGGGAAAATTACAGTCACATATGGATAAACCTCCAAA
GCTGTGGGCATAGACAAGATAGAAAGCTCCCAAATCTTGGGGAGATCCTT
GAAAATGATGGCAATAATGTTTGTTCCTTAATTAGTGATTGGTCTATGCA
TACGTTGCCCTATGCCTGATGGAATTAGTAAAGCCTGTTTTATTTGTTTT
GATACAATCGATAATCGGGGAGAAAGGAGTCGAACTTGGGACATCAGGTG
CAAGACTCAATACCTTTTAGTTTACCATTTAAGTTACAAATCTCTTGCAG
TAAGACTACTTTATTAATTTTTACTCACTTTTGTAGACTCATTTTAAATT
CTTGGTAACATTGTAATCGTCGTCAGTACAAGAAGGAAGCCTCAACCTAC
ACATCACATATATCACACATTGTATATATATCCCCGCAAGGAGACTCAAT
TGGTCAAGCTTCTAATACATTAGAAAGCTACACGATGGCATCTGATCTCT
ATGTGCAACCTGAGTTTTGTGGTGAGATTACATCTAACGAGGTGATTGGC
TTTGATCTCAATCTGTCATCCATGTCATGCCTTCCCCACCCTTCTCTTTC
GGCTTTGGAGGACGATTCGGCAAACTGGGTGAGTCCATTCGTCGACAAAA
CAAGAAATCATAAGAGGCTAAAACAGGAACATGATGCCAATTATGGATTC
AAAGTGGGTACTAATTACTCTAGTTTTTACACTGGCAGTGACAGCAATAT
GTGTACTAGTGGCTTCACTAGCTTGCCAACAATCCAATTCCGTGATCACA
TATCCGCACACAAGCGGAGATATTTGGCTGCAGAGGCCATGGAAGAAGCC
TTTGCAACCTTAATGAGAGACAAAGAAGATGAATCCGAGGAAGGAGGAGG
AAGTGAAGATGAAATAAAACTAGTCCAACAACTTATCGCTTGTGCCGAGG
CTGTGGCTTGTCGTGACAAAGCTCATGCCTCAGCATTGCTTTTTGAGCTG
AGAGCTAATGCGCAGGCCTTCGGGACATCATTCCAGCGAGTATCTTCCTG
CTTTGTCCAAGGCCTTGCCRACCGCCTTGCGCTAGTTCAACCACTAGGGG
CTGGAGGAGTAATAGACCCGAACGTGAAATCAAAGCCTTTTTCAGCAGAG
AAAGGACCTTTTTCAGCAGAGAAGGACGAGGCTTTACACCTTGTTTATGA
AATCTGCCCACAGATCCAATTTGGTCATTTCGTAGCGAATGCATCAATAT
TGGAAGCCTTTGAGGGAGGAAGCTCAGTCCATGTCATAGACTTAGGCATG
ACCCTAGGCCTCCAGCACGGGTACCAATGGCGCGACTTAATAGACCGTCT
AGCAAACCGTCCAGGACAACCCTTGCACYRCCTTCGCATTACAGGAGTTG
GTAGCTCTTCCGAACGCCTTCAAGCAATCGGCGACGATCTCAAGCTGCAT
GCTCAAAGCATGAAAATAAATTTSGACTTTTCAGAAGTGGAGAGCAACTT
GGAGAACCTTAAGCCTCAAGATTTCCATTTGGTTGATGGGGAGATTTTGA
TCATCAATAGCATTCTTCAACTTCATTGCTTGGTGAAAGAGAGCAGAGGG
ACATTGAACTCAGCTTTACAAACACTWCACGAGCTGTCACCAAAGCTTAT
GGTTTTGGTTGAGCAGGACACAAGCCACAACGGGCCTTTCTTTCTAGGGA
GGTTCATGGAGGCACTGCATAACTACTCCGCCATCTTTGACTCCTTAGAC
GCAATGCTGCCCAAGTACGACACGAGGAGGGTAAAAATGGAGCAGTTTTA
TTTTGGGGAGGAGATTAAGAACATCGTAAGCTGCGAGGGACCAGCCAGGG
TGGAGAGACACGAAAGGGTTGATCAATGGCGCCGTAGGATGAGGCGTGCG
GGGTTCCAACCGGCGCCTTTGAGGACGATGGCACAGGCCGTGAAATGGCT
AGAAACTAATGCTTGTGAGGGTTACACGGTTGTTGAAGACAAGGGTTGCT
TGGTTCTTGGATGGAAATCAAAACCTATCATTGCAACTTCTTGCTGGAAA
TGA
back to top

protein sequence of MDP0000464809

>MDP0000464809 ID=MDP0000464809; Name=MDP0000464809; organism=Malus x domestica; type=polypeptide; length=952bp
MPPLSLKLHSLFFKYHLRHQLHNLTQSAQLQNTDPKFGITSRPEEPVVPA
NPTFQNGVATKNIHIDPNSSLSLRIFLPDTVLPLKAPNPTSRVGALLSPS
PXCSNSDDGVVYRGYSPDQLVGRRHRKVPIFLQFHGGGFVSGSNDTSWND
AFCRRMAKLCDAIVVAVGYRLAPESPYPAAFEDGVTVLKWVAKQANLALV
QKGRSRIFDSFGSSMVEPWLAAHGDPSRCVLLGVSCGANLADYVARKAVE
AGDLLDPIKVVAQVLMYPFFIGSTPTRSEIKLANSYLFDKATCMLAWKLF
QTEEEFDLDHPAGNPLMPAGRGPPLKTMPPTLTVVAQHDWMRDRGIAYSE
ELRKANVDAPLLDYKDTVHEFATLDVLLETPQAKACAEDITIWYKKEAST
YTSHISHIVYISPQGDSIGQASNTLESYTMASDLYVQPEFCGEITSNEVI
GFDLNLSSMSCLPHPSLSALEDDSANWVSPFVDKTRNHKRLKQEHDANYG
FKVGTNYSSFYTGSDSNMCTSGFTSLPTIQFRDHISAHKRRYLAAEAMEE
AFATLMRDKEDESEEGGGSEDEIKLVQQLIACAEAVACRDKAHASALLFE
LRANAQAFGTSFQRVSSCFVQGLAXRLALVQPLGAGGVIDPNVKSKPFSA
EKGPFSAEKDEALHLVYEICPQIQFGHFVANASILEAFEGGSSVHVIDLG
MTLGLQHGYQWRDLIDRLANRPGQPLHXLRITGVGSSSERLQAIGDDLKL
HAQSMKINXDFSEVESNLENLKPQDFHLVDGEILIINSILQLHCLVKESR
GTLNSALQTLHELSPKLMVLVEQDTSHNGPFFLGRFMEALHNYSAIFDSL
DAMLPKYDTRRVKMEQFYFGEEIKNIVSCEGPARVERHERVDQWRRRMRR
AGFQPAPLRTMAQAVKWLETNACEGYTVVEDKGCLVLGWKSKPIIATSCW
K*
back to top

mRNA from alignment at chr13:7394453..7398805+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000464809 ID=MDP0000464809; Name=MDP0000464809; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr13:7394453..7398805+ (Malus x domestica
back to top

mRNA from alignment at MDC003994.328:7360..11712+

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MDP0000464809 ID=MDP0000464809; Name=MDP0000464809; organism=Malus x domestica; type=mRNA; length=4353bp; location=Sequence derived from: MDC003994.328:7360..11712+ (Malus x domestica
ATGCCACCCCTAAGTTTGAAGCTKCACAGCTTGTTCTTCAAGTACCATCT CAGACACCAATTACACAACCTAACCCAATCAGCGCAACTCCAAAACACAG ACCCGAAATTTGGCATCACTTCCCGCCCCGAAGAGCCCGTCGTTCCCGCC AACCCCACTTTCCAAAACGGCGTCGCCACCAAAAACATMCACATCGACCC CAACTCCTCCCTCTCCCTCCGCATCTTCTTACCTGACACCGTCCTCCCCC TCAAAGCACCAAATCCCACGTCTCGTGTCGGCGCCCTGTTGTCTCCCTCC CCTGYCTGCTCTAACTCCGACGATGGTGTCGTGTACAGGGGATATTCTCC CGATCAGTTAGTGGGGAGGCGACACCGGAAGGTTCCGATATTTTTGCAGT TTCACGGAGGTGGGTTTGTGAGCGGGAGCAACGACACGTCGTGGAACGAC GCGTTCTGCAGGAGGATGGCGAAGCTGTGTGACGCGATCGTGGTGGCGGT GGGGTATAGGCTGGCGCCGGAGAGTCCGTACCCAGCGGCGTTTGAGGACG GGGTTACGGTGTTGAAGTGGGTAGCAAAGCAGGCCAACTTGGCCTTGGTT CAAAAGGGACGGAGTCGTATCTTTGACAGCTTTGGGTCTTCGATGGTTGA GCCATGGTTGGCTGCTCATGGAGATCCATCTAGGTACTTACTGCCTATCA GCCATATCCGGATTGTTTAATTAGTATAATTAGTGTTGGTATATCATATA TGCACAAATGGACCCTGTACAAAACTTTCATTGAAATAGATAAATTATGG TTTAGTGCTCCTTTATTATTGTTTAGTATATTCTATTTTTTATTATTAAG TTGATGGATGGATAAAATTGGAACAATCACAGAAGGTTCGCAAAAGTTTA TGCAGTTCACTCAACAAAATTCAAATCGTGGGGTATTTAGATCGTATACA TAGAACTAGTGACACTAAAATAACAATGCGATTTATATAGATTAGGGTTT AATGTCTTTTATTATTTAGTTAATTTATGTTTATGCTTTTTAATTAAAAT TTGTAACATGTTCTATTTGTGCATAGTTTTTGTGTGTATATTCTTGGATT TTGAACTAACCAGTTGGGTTCCCAAAATTTAAAGTACATGGATTTGCTTA ATGATTAGTGTTTTGATTATGTTCAGCCCTTTTTAGTTTGTACACCTTTT GTTTAAATTCAGTAACTAATGAACATTAACATGTTATTTTCTTATCAGAA CAGATGTGTACTTCTTGGAGTGAGCTGTGGAGCTAACTTGGCAGACTATG TCGCTCGGAAGGCTGTGGAGGCAGGCGACCTCTTGGACCCGATAAAGGTG GTAGCACAAGTACTAATGTACCCCTTTTTCATTGGAAGCACTCCCACCAG GTCTGAGATTAAGCTAGCCAACTCCTACTTATTCGACAAGGCTACGTGTA TGCTAGCATGGAAGCTATTTCAAACAGAGGAAGAGTTTGATTTAGACCAT CCCGCCGGCAACCCCCTCATGCCTGCAGGGAGAGGGCCACCCTTAAAGAC CATGCCTCCGACACTTACAGTTGTCGCGCAGCATGATTGGATGCGCGATC GTGGCATTGCTTACTCCGAAGAATTGAGGAAGGCTAATGTRGATGCACCT CTTTTAGATTACAAGGATACTGTGCACGAGTTTGCTACTCTTGATGTGCT CCTTGAGACGCCCCAGGCCAAGGCTTGTGCAGAGGATATCACTATATGGG TCAAGAAGTATATATCACTCAGAGGCCATGAGTTTTCTTATTGATTGTGA ATATGTGATAAGTTCCGAAGTTGTTCAAATTGAAGCACATATGAACATGC ATTTGAACAGCTTCGGGACAACGAAAGTGAACATTTTTGTGTACAAAATC ATGTCAGTTCAAATTTTTTTACATAGTTTTCATCAGATTAGTTTTGAGAT ATCTGATCCTTATTGAGCTGTGCATTGCACCCTGCAAACATATTTTGTTT TGTTCTTTTGGAGTTGTTGGCCGCAGTCCATTTAGCTCCAAGATTGTCTC CATACCGGTGGTATATCCTATACATGTTCTCTTGCTCTTATGCATTTTAG AGCCTGGATAAATTAATTGTCCATGACAGCATCACCTACGCAGGTCGGCT ATAAGCTTAATTGATTAACAGAATTTACCCCTGCTAAAGCGCTAACTATT CCAGGCCATATGTGTTATTTTAAACCATGTCAGGATCCGGCGGACTTAGT AAAAGGAAGAGGCGAAAAGAATAAGTTTTATAACCGAAAGTAGCATTGGA GAATTCTGTATTTGGGGAAAATTACAGTCACATATGGATAAACCTCCAAA GCTGTGGGCATAGACAAGATAGAAAGCTCCCAAATCTTGGGGAGATCCTT GAAAATGATGGCAATAATGTTTGTTCCTTAATTAGTGATTGGTCTATGCA TACGTTGCCCTATGCCTGATGGAATTAGTAAAGCCTGTTTTATTTGTTTT GATACAATCGATAATCGGGGAGAAAGGAGTCGAACTTGGGACATCAGGTG CAAGACTCAATACCTTTTAGTTTACCATTTAAGTTACAAATCTCTTGCAG TAAGACTACTTTATTAATTTTTACTCACTTTTGTAGACTCATTTTAAATT CTTGGTAACATTGTAATCGTCGTCAGTACAAGAAGGAAGCCTCAACCTAC ACATCACATATATCACACATTGTATATATATCCCCGCAAGGAGACTCAAT TGGTCAAGCTTCTAATACATTAGAAAGCTACACGATGGCATCTGATCTCT ATGTGCAACCTGAGTTTTGTGGTGAGATTACATCTAACGAGGTGATTGGC TTTGATCTCAATCTGTCATCCATGTCATGCCTTCCCCACCCTTCTCTTTC GGCTTTGGAGGACGATTCGGCAAACTGGGTGAGTCCATTCGTCGACAAAA CAAGAAATCATAAGAGGCTAAAACAGGAACATGATGCCAATTATGGATTC AAAGTGGGTACTAATTACTCTAGTTTTTACACTGGCAGTGACAGCAATAT GTGTACTAGTGGCTTCACTAGCTTGCCAACAATCCAATTCCGTGATCACA TATCCGCACACAAGCGGAGATATTTGGCTGCAGAGGCCATGGAAGAAGCC TTTGCAACCTTAATGAGAGACAAAGAAGATGAATCCGAGGAAGGAGGAGG AAGTGAAGATGAAATAAAACTAGTCCAACAACTTATCGCTTGTGCCGAGG CTGTGGCTTGTCGTGACAAAGCTCATGCCTCAGCATTGCTTTTTGAGCTG AGAGCTAATGCGCAGGCCTTCGGGACATCATTCCAGCGAGTATCTTCCTG CTTTGTCCAAGGCCTTGCCRACCGCCTTGCGCTAGTTCAACCACTAGGGG CTGGAGGAGTAATAGACCCGAACGTGAAATCAAAGCCTTTTTCAGCAGAG AAAGGACCTTTTTCAGCAGAGAAGGACGAGGCTTTACACCTTGTTTATGA AATCTGCCCACAGATCCAATTTGGTCATTTCGTAGCGAATGCATCAATAT TGGAAGCCTTTGAGGGAGGAAGCTCAGTCCATGTCATAGACTTAGGCATG ACCCTAGGCCTCCAGCACGGGTACCAATGGCGCGACTTAATAGACCGTCT AGCAAACCGTCCAGGACAACCCTTGCACYRCCTTCGCATTACAGGAGTTG GTAGCTCTTCCGAACGCCTTCAAGCAATCGGCGACGATCTCAAGCTGCAT GCTCAAAGCATGAAAATAAATTTSGACTTTTCAGAAGTGGAGAGCAACTT GGAGAACCTTAAGCCTCAAGATTTCCATTTGGTTGATGGGGAGATTTTGA TCATCAATAGCATTCTTCAACTTCATTGCTTGGTGAAAGAGAGCAGAGGG ACATTGAACTCAGCTTTACAAACACTWCACGAGCTGTCACCAAAGCTTAT GGTTTTGGTTGAGCAGGACACAAGCCACAACGGGCCTTTCTTTCTAGGGA GGTTCATGGAGGCACTGCATAACTACTCCGCCATCTTTGACTCCTTAGAC GCAATGCTGCCCAAGTACGACACGAGGAGGGTAAAAATGGAGCAGTTTTA TTTTGGGGAGGAGATTAAGAACATCGTAAGCTGCGAGGGACCAGCCAGGG TGGAGAGACACGAAAGGGTTGATCAATGGCGCCGTAGGATGAGGCGTGCG GGGTTCCAACCGGCGCCTTTGAGGACGATGGCACAGGCCGTGAAATGGCT AGAAACTAATGCTTGTGAGGGTTACACGGTTGTTGAAGACAAGGGTTGCT TGGTTCTTGGATGGAAATCAAAACCTATCATTGCAACTTCTTGCTGGAAA TGA
back to top

Coding sequence (CDS) from alignment at MDC003994.328:7360..11712+

>MDP0000464809 ID=MDP0000464809; Name=MDP0000464809; organism=Malus x domestica; type=CDS; length=2856bp; location=Sequence derived from: MDC003994.328:7360..11712+ (Malus x domestica
ATGCCACCCCTAAGTTTGAAGCTKCACAGCTTGTTCTTCAAGTACCATCT
CAGACACCAATTACACAACCTAACCCAATCAGCGCAACTCCAAAACACAG
ACCCGAAATTTGGCATCACTTCCCGCCCCGAAGAGCCCGTCGTTCCCGCC
AACCCCACTTTCCAAAACGGCGTCGCCACCAAAAACATMCACATCGACCC
CAACTCCTCCCTCTCCCTCCGCATCTTCTTACCTGACACCGTCCTCCCCC
TCAAAGCACCAAATCCCACGTCTCGTGTCGGCGCCCTGTTGTCTCCCTCC
CCTGYCTGCTCTAACTCCGACGATGGTGTCGTGTACAGGGGATATTCTCC
CGATCAGTTAGTGGGGAGGCGACACCGGAAGGTTCCGATATTTTTGCAGT
TTCACGGAGGTGGGTTTGTGAGCGGGAGCAACGACACGTCGTGGAACGAC
GCGTTCTGCAGGAGGATGGCGAAGCTGTGTGACGCGATCGTGGTGGCGGT
GGGGTATAGGCTGGCGCCGGAGAGTCCGTACCCAGCGGCGTTTGAGGACG
GGGTTACGGTGTTGAAGTGGGTAGCAAAGCAGGCCAACTTGGCCTTGGTT
CAAAAGGGACGGAGTCGTATCTTTGACAGCTTTGGGTCTTCGATGGTTGA
GCCATGGTTGGCTGCTCATGGAGATCCATCTAGATGTGTACTTCTTGGAG
TGAGCTGTGGAGCTAACTTGGCAGACTATGTCGCTCGGAAGGCTGTGGAG
GCAGGCGACCTCTTGGACCCGATAAAGGTGGTAGCACAAGTACTAATGTA
CCCCTTTTTCATTGGAAGCACTCCCACCAGGTCTGAGATTAAGCTAGCCA
ACTCCTACTTATTCGACAAGGCTACGTGTATGCTAGCATGGAAGCTATTT
CAAACAGAGGAAGAGTTTGATTTAGACCATCCCGCCGGCAACCCCCTCAT
GCCTGCAGGGAGAGGGCCACCCTTAAAGACCATGCCTCCGACACTTACAG
TTGTCGCGCAGCATGATTGGATGCGCGATCGTGGCATTGCTTACTCCGAA
GAATTGAGGAAGGCTAATGTRGATGCACCTCTTTTAGATTACAAGGATAC
TGTGCACGAGTTTGCTACTCTTGATGTGCTCCTTGAGACGCCCCAGGCCA
AGGCTTGTGCAGAGGATATCACTATATGGTACAAGAAGGAAGCCTCAACC
TACACATCACATATATCACACATTGTATATATATCCCCGCAAGGAGACTC
AATTGGTCAAGCTTCTAATACATTAGAAAGCTACACGATGGCATCTGATC
TCTATGTGCAACCTGAGTTTTGTGGTGAGATTACATCTAACGAGGTGATT
GGCTTTGATCTCAATCTGTCATCCATGTCATGCCTTCCCCACCCTTCTCT
TTCGGCTTTGGAGGACGATTCGGCAAACTGGGTGAGTCCATTCGTCGACA
AAACAAGAAATCATAAGAGGCTAAAACAGGAACATGATGCCAATTATGGA
TTCAAAGTGGGTACTAATTACTCTAGTTTTTACACTGGCAGTGACAGCAA
TATGTGTACTAGTGGCTTCACTAGCTTGCCAACAATCCAATTCCGTGATC
ACATATCCGCACACAAGCGGAGATATTTGGCTGCAGAGGCCATGGAAGAA
GCCTTTGCAACCTTAATGAGAGACAAAGAAGATGAATCCGAGGAAGGAGG
AGGAAGTGAAGATGAAATAAAACTAGTCCAACAACTTATCGCTTGTGCCG
AGGCTGTGGCTTGTCGTGACAAAGCTCATGCCTCAGCATTGCTTTTTGAG
CTGAGAGCTAATGCGCAGGCCTTCGGGACATCATTCCAGCGAGTATCTTC
CTGCTTTGTCCAAGGCCTTGCCRACCGCCTTGCGCTAGTTCAACCACTAG
GGGCTGGAGGAGTAATAGACCCGAACGTGAAATCAAAGCCTTTTTCAGCA
GAGAAAGGACCTTTTTCAGCAGAGAAGGACGAGGCTTTACACCTTGTTTA
TGAAATCTGCCCACAGATCCAATTTGGTCATTTCGTAGCGAATGCATCAA
TATTGGAAGCCTTTGAGGGAGGAAGCTCAGTCCATGTCATAGACTTAGGC
ATGACCCTAGGCCTCCAGCACGGGTACCAATGGCGCGACTTAATAGACCG
TCTAGCAAACCGTCCAGGACAACCCTTGCACYRCCTTCGCATTACAGGAG
TTGGTAGCTCTTCCGAACGCCTTCAAGCAATCGGCGACGATCTCAAGCTG
CATGCTCAAAGCATGAAAATAAATTTSGACTTTTCAGAAGTGGAGAGCAA
CTTGGAGAACCTTAAGCCTCAAGATTTCCATTTGGTTGATGGGGAGATTT
TGATCATCAATAGCATTCTTCAACTTCATTGCTTGGTGAAAGAGAGCAGA
GGGACATTGAACTCAGCTTTACAAACACTWCACGAGCTGTCACCAAAGCT
TATGGTTTTGGTTGAGCAGGACACAAGCCACAACGGGCCTTTCTTTCTAG
GGAGGTTCATGGAGGCACTGCATAACTACTCCGCCATCTTTGACTCCTTA
GACGCAATGCTGCCCAAGTACGACACGAGGAGGGTAAAAATGGAGCAGTT
TTATTTTGGGGAGGAGATTAAGAACATCGTAAGCTGCGAGGGACCAGCCA
GGGTGGAGAGACACGAAAGGGTTGATCAATGGCGCCGTAGGATGAGGCGT
GCGGGGTTCCAACCGGCGCCTTTGAGGACGATGGCACAGGCCGTGAAATG
GCTAGAAACTAATGCTTGTGAGGGTTACACGGTTGTTGAAGACAAGGGTT
GCTTGGTTCTTGGATGGAAATCAAAACCTATCATTGCAACTTCTTGCTGG
AAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR005202TF_GRAS
IPR013094AB_hydrolase_3
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity