MDP0000269044, MDP0000269044 (mRNA) Malus spp. (apple)

Transcript Overview


Name	MDP0000269044
Unique Name	MDP0000269044
Type	mRNA
Organism	Malus x domestica (Apple)
Sequence length	4859

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
chr17	chromosome	chr17:10818117..10822975 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a
MDC001358.428	contig	MDC001358.428:12474..17332 -	Malus x domestica Whole Genome v1.0 Assembly & Annotation	n/a

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Malus x domestica Whole Genome v1.0 Assembly & Annotation	2012-07-26
InterProScan of Malus x domestica Whole Genome v1.0 mRNA	2012-07-23

Relationships

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000269044_exon_1	MDP0000269044_exon_1	Malus x domestica	CDS
MDP0000269044_exon_2	MDP0000269044_exon_2	Malus x domestica	CDS
MDP0000269044_exon_3	MDP0000269044_exon_3	Malus x domestica	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MDP0000269044	MDP0000269044	Malus x domestica	polypeptide

InterPro

Analysis Name: InterProScan of Malus x domestica Whole Genome v1.0 mRNA
Date Performed: 2012-07-23


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001141	Ribosomal protein L27e	PRODOM	PD009396	RL27_PEA_Q05462;	coord: 60..133 score: 3
IPR001141	Ribosomal protein L27e	PANTHER	PTHR10497	60S RIBOSOMAL PROTEIN L27	coord: 1..133 score: 2.2
IPR001141	Ribosomal protein L27e	PFAM	PF01777	Ribosomal_L27e	coord: 52..134 score: 2.3
IPR005202	Transcription factor GRAS	PFAM	PF03514	GRAS	coord: 279..638 score: 4e
IPR005202	Transcription factor GRAS	PROFILE	PS50985	GRAS	coord: 251..618 score: 54
IPR014722	Translation protein SH3-like, subgroup	GENE3D	2.30.30.30	no description	coord: 3..113 score: 6
None	No IPR available	COIL	coil	coiled-coil	coord: 100..121 score
None	No IPR available	SEG	seg	seg	coord: 111..122 score: NAcoord: 176..196 score: NAcoord: 197..219 score: NAcoord: 274..282 score
None	No IPR available	SEG	seg	seg	coord: 1..20 score: NAcoord: 63..75 score
None	No IPR available	SEG	seg	seg	coord: 90..102 score
None	No IPR available	SEG	seg	seg	coord: 15..26 score: NAcoord: 31..49 score
None	No IPR available	SEG	seg	seg	coord: 28..49 score
None	No IPR available	SEG	seg	seg	coord: 54..70 score: NAcoord: 188..222 score
None	No IPR available	SEG	seg	seg	coord: 59..84 score
None	No IPR available	SEG	seg	seg	coord: 4..26 score
None	No IPR available	SEG	seg	seg	coord: 2..33 score: NAcoord: 47..69 score
None	No IPR available	SEG	seg	seg	coord: 14..36 score
None	No IPR available	SEG	seg	seg	coord: 2..15 score
None	No IPR available	SEG	seg	seg	coord: 56..71 score: NAcoord: 96..113 score
None	No IPR available	SEG	seg	seg	coord: 31..52 score: NAcoord: 57..81 score: NAcoord: 96..131 score
None	No IPR available	SEG	seg	seg	coord: 4..18 score: NAcoord: 96..107 score

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr17:10818117..10822975-
mRNA from alignment at MDC001358.428:12474..17332-
coding sequence from alignment at MDC001358.428:12474..17332-

mRNA sequence

>MDP0000269044 ID=MDP0000269044; Name=MDP0000269044; organism=Malus x domestica; type=mRNA; length=4859bp
ATGGTGAAGTTTCTGAAGCCAAACAAGGCGGTGATCAACCTCCAGGGCCG
CTACGCCGGGCGCAAGGCCGTCATTGTTCGCGCCTTCGACGAGGGCACCC
GCGATCGTCCCTACGGCCACTGTTTGGTCGCGGGGATAAAGAAGTACCCG
AGCAAGGTCATCCGCAAGGACTCCGCCAAGAAGACGGCCAAGAAATCCAG
AGTGAAGGCCTTCGTGAAGCTCGTCAACTACCAGCACCTGATGCCCACCC
GGTACACCCTGGATGTGGATCTCAAGGACGTCGTCAACGTCGAGTCTTTG
CAGACCAAGGATAAGAAGGTCACTGCATTGAAGGAGGTGAAGAAGCGGTT
CGAGGAGCGGTTCAAGACCGGGAAAAACAGGTGGTTCTTCACCAAGCTCA
GGTTCTGAGAAGGGAGATTCAACAGCSCCGTATGGGAAATGGGGTCTGAT
TTCCCCACTGTGTTTTTTTTTTCAAGTTAAAGTTTTAATTTTGGAATTAA
ATGGATGAGACCTTTTTTGGATTTATGGATTAATGTTTAGCTAAACAATT
AGAGTTTGCTGTTATTGAGATATTTAATTTGTGGCATTCCTTGTTATGCT
ATGTTTATCTGCGATTTTAGACCAGCATTGCTMTTCTGTGTTGATTGAAA
TGTTTATTTCTTGCAATTACTTTGTCAATTTTATTTCGGGATTCATAGAG
ATTGGATTTGAGTTTTAGGTTATTTTGAGCTGCTAGATGTGCTCTGTCGA
TTGCCTAGTTGCAAAGCGAAATTTTGTTTTGCACCGATGTTCTGCTTTTG
GCATTTGAACCATGTTGTTTCGGTTTGATATGATTGAATTGTATGTTGTG
GCTTCTTGTTTGTCAATATCATTGTCGGTTGATAAAATCTTAACTGATGT
TTGGTGTTTGTCAATATCATTGTCGGTTATAAAATCTTCGCTGATGGGTG
TCTTGAGTTTTATGGTTGTGCTTGTGGTAAAATTAGGGTTCAAGTTAGAT
AGGACCTCAAACTTSGGACTTTATYGAGTAGACATTGTTTATCATTTCAG
CATGATGTGTTGAATTGAGTCATCAACTGGTGGCTGGTGATCAAATGACT
TTGGTGTCAAAATACAGACGCGAATGAAGTTGATGTTTGTTTTCGGTTGT
AACTTATAATCATGTGGCTCTGCTTGTTTTGTGTTTATCATGAAAGGTTT
CGATGCTAAGCCGATGTAGCATTGTATGGATTGATTTGGTAGTGTGAATT
TTTTGTTGCAAACATTTCCATGCCAACTCTTTCATAGATGATTTTCAATT
TTTCATGTGTGGGCAAGTACAGTATTTGTTCKYAGGCGTRATCAGGTAAT
GTGAGGTTTAATCTATTTCACTCGTTTCTTAGAACGGGTTTCTGACATTT
GCTACATGCGTTGATATGTCATAGACTTGTATCATTGGATTCAAAACTCC
GAGAGAAGTCTCGCTTTCATTTTGATGTCGAAAATTATGCAATTTGGATT
TGAACTCCGAGAGAAGTCTTGTTTTCACTCGTTTTCTCATGCACCCTCCA
GTTTCTGTAACCCTTGATTTGCTTTGATTCTCTGTTGATTCATCCAMTTC
GAAGGCACTGGAGGGGTTCAGTGGAAGAAAGTCGTGTGTGGGGAAATCAC
TTCCCATCTAATGAAACTTTACAAATCTCAATAGAAGCCTTRGTGAATAT
CCTCTCTATCTATTCGTTAGATGCATTCAAATTCACAAAGCACAATCCTT
ATCTCCAAATTTCCAAGCCGAACCCTTCTAAATATAAAACATACTTCAAA
CAGACTTCCATTGACGAGCAACTCCGGTTCCCTGCATGTTTAAGTGTGCG
CTGCTCCATGTCACCACGGCCTTGGCGCTCCGCCACTTGACCACCGGAAG
TAGAGAATCCTTCTGTACCAGTTGAAGAGCCAACCACCCCTATCGTACAA
CACTCAGTTTATTCTTTTTGATGGCCACTTGCTCAGTTTGCTCATTTGAC
GTTTGAATTTTGTAAATTAAAAAAAAGAAGCCATTTAGTATTACGGTCTA
GTGATATTCTTCTTCACATGTAAGTGAGAGGTTTTATATTCGATTGTTGT
CAATGGCGCAAATTTGAACCATATTATTACTAGCACATTGTGAAGCTTAA
CCTATTCTCTCATATTTTTAGTGCAGATAATATTGTTTATTCAGAAAAAA
ACAAAATCAGAAAAGAAAGAAAAACGATGAAGTCCAACTAAGCGTCCAAG
GTAGTACAGCTTGCAAAGCCGCCATCTAAAGTTCCAAAAGTTTGAGAATT
TTGAATGGTCTAGATGTTTGCATACAACCATACAAACAATATTCAAATCT
CCTCTCTCTCTCTCTCTCAACATAAAGTTAACAATCCACACAAAGACAAA
CACTCCCCCTAAACATCGTCCCGAGAATCCAAAGATGATGCAATTGCACC
ATTAATCAACTTATCAACCCTTAACTTATTCATTTAAATCCACAATCAAC
CCACCCTTATTCTATATTTTCCCTAATCCCCCAACACAACAAACGGACTT
AACGACAACGCCTAAACGGAGTACTTAACCAGGACGATTTCCCCACACGT
GTCAACTCCTCACCCCCCACACGTTCGGGAAATTTTTTTTTCATTGTGCT
ATAACCTACCTCGGGTGACCAAGTTTTAATATAATAAGTGACGGAATTTT
TTTTTCAAGCATCTAACTAGTTGTATTATAATGCTTTAAATTTTTCAGTG
TACCGAAAATACGGATTAGCACATTAAAAAATCTCTCCACRTGCTAGCAG
CTATTAGYGAAWTTTTTTTCATTGTATCGAAAATACGGTTTGACACATAA
TTTGTAATACAAGTGGCTGAAATTTTTATCAAGCCACTATGGGCTGGTTT
GATATTATTGTGCTTTGAAAAAAAACTGCTTCTGTTGTGCTGTGAGAATA
AGCAGCTGTGAAATMAAACAGTAGATTGTTTGGTAAATTTTTTTGTAAAA
GTGCTTTTGAAAAAAAAAAAGCAATATTATAGTGTTTGATAAATTTTTAT
GTAAAACAGATGTGAAAAAAAAACTAGTTTTTCAAAGCTRAATTTTGCAA
CTTTGTATTTTTAACTTTTTTTTAAKCTTTTTTTTCAGAATCATTTCAGT
ACTAAATCAGCACTATGTGTTAAGAATCTTATGGTATCCATTTGTCAGAA
TGAAAAATCTCTCCAATCGCCTCCCCMCCCTAAAGTTAACAGACTTTCTG
TTTCATTTCCTGTAATTTCTCTCACTCTCTCGCACTCTCTCTCCCTCTCT
CTCTCTAAACAGCTTTCTCTCTCTACTTTCTCTCTCTACTTTCTCTCCTC
CCTCTCTCTCTGACAAAGCTTTCTGCAGAACTCTCTGTACGGGCGTTTGG
TTGTCTTTCTCGCTTTTCTTTGTCTCTTTCCGCTCGAAAGCTTCCGAGCT
TTTTATATTCTCCCCACACTTCCTCCTTCCTCCTTCCTCCTTCTCCTCTA
CCAGTCATGCTTCAGAGCTTAATTCCTCAATCCCCGATCGCCGCCGCCAA
CCCTAACATTAACAACCCTACCTCCTCCTCCTCCTCCTCCATGAAGACCA
AGCGCGTTGACCGCGACCTCGCTGGCAGTGGAAGCGGCGATTCCGACGCT
GAAGACCCCTCCTTCACCAAGCGCCTCAGTTCCGGCCGAAACTTCCGTGA
ACAAACCGCAGACGATCGTGATACCGAAACGGTGGAGGAGGGCGAGTCGG
CCGGACTCAGACTGTTGGGGCTCCTGCTACAATGCGCCGAGTGCGTCGCC
ATGGACAAACTTGACGACGCCAGCGACCTGTTACCGGAGATCGCGGAGCT
ATCATCGCCTTTCGGGTCGTCGCCGGAGCGAATCGGCGCGTACTTCGCGC
ACGCACTGCAGACGCGCGTGGTCAGCTCCTGCTTAGGTACCTACTCACCG
CTTACCACCAAAACCCTAACGCTCGCTCAGTCGCAGCGGATCTTCAACGC
GCTCCAATCCTACAACTCCATCAGTCCGCTAGTCAAATTCTCTCACTTCA
CGTCCAATCAGGCGATTTTCCAGGCGCTGGACGGCGAGGATCACATCCAC
GTCATCGATTTGGATATAATGCAAGGCCTCCAGTGGCCAGGATTGTTCCA
CATCCTAGCCTCGCGGACGAAGAAGATCCGGTCAATGCGGATAACCGGGT
TCGGGTCCTCGTCGGAGCTCCTCGAGTCGACGGGGCGGAGACTCGCCGAT
TTCGCGAGCTCGCTCGGCCTCCCCTTCGAGTTCCAGCCGCTGGAGGGCAA
AATCGGGAGCATAACCGAGCTGAATCAACTCGGAATCAAACCGAGCGAGG
CCACCGTGATCCACTGGATGCACCATTGCTTGTACGACGTCACCGGCAGC
GATTTGGCAGCGCTGAGGTTGCTGGGCTCTCTGAGACCGAAGCTGATCAC
GATCGCCGAACAGGATTTGAGCCACAGCGGCAGCTTCTTGGGAAGGTTCG
TGGAGGCCTTGCATTACTACAGCGCGTTGTTTGATGCGCTCGGGGACGGA
CTGGGCGCGGACAGCCTGGAGAGGCATATGGTGGAGCAGCAGCTGTTCGG
CTGCGAGATTAGGAACATCCTCGCGGTGGGCGGGCCGAAGAGGACCGGAG
AGGTGAAGCTGGAGAGGTGGGGGGATGAGCTGAAGCGGGTCGGRTTTCGG
GGCGTTTCGCTTGGCGGGAACCCGGCAGCGCAGGCGAGCTTGCTGCTGGG
GATGTTTCCGTGGAAGGGGTACACCTTGGTGGAGGAGAATGGGTGCTTGA
AGTTGGGTTGGAAGGACCTGTCGTTGCTCACAGCCTCTGCCTGGCAGCCG
TTGGATTGA

protein sequence of MDP0000269044

>MDP0000269044 ID=MDP0000269044; Name=MDP0000269044; organism=Malus x domestica; type=polypeptide; length=641bp
MVKFLKPNKAVINLQGRYAGRKAVIVRAFDEGTRDRPYGHCLVAGIKKYP
SKVIRKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVNVESL
QTKDKKVTALKEVKKRFEERFKTGKNRWFFTKLSTKSALCVKNLMLSAEL
SVRAFGCLSRFSLSLSARKLPSFLYSPHTSSFLLPPSPLPVMLQSLIPQS
PIAAANPNINNPTSSSSSSMKTKRVDRDLAGSGSGDSDAEDPSFTKRLSS
GRNFREQTADDRDTETVEEGESAGLRLLGLLLQCAECVAMDKLDDASDLL
PEIAELSSPFGSSPERIGAYFAHALQTRVVSSCLGTYSPLTTKTLTLAQS
QRIFNALQSYNSISPLVKFSHFTSNQAIFQALDGEDHIHVIDLDIMQGLQ
WPGLFHILASRTKKIRSMRITGFGSSSELLESTGRRLADFASSLGLPFEF
QPLEGKIGSITELNQLGIKPSEATVIHWMHHCLYDVTGSDLAALRLLGSL
RPKLITIAEQDLSHSGSFLGRFVEALHYYSALFDALGDGLGADSLERHMV
EQQLFGCEIRNILAVGGPKRTGEVKLERWGDELKRVGFRGVSLGGNPAAQ
ASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPLD

mRNA from alignment at chr17:10818117..10822975-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000269044 ID=MDP0000269044; Name=MDP0000269044; organism=Malus x domestica; type=mRNA; location=Sequence derived from: chr17:10818117..10822975- (Malus x domestica

mRNA from alignment at MDC001358.428:12474..17332-

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>MDP0000269044 ID=MDP0000269044; Name=MDP0000269044; organism=Malus x domestica; type=mRNA; length=4859bp; location=Sequence derived from: MDC001358.428:12474..17332- (Malus x domestica
ATGGTGAAGTTTCTGAAGCCAAACAAGGCGGTGATCAACCTCCAGGGCCG
CTACGCCGGGCGCAAGGCCGTCATTGTTCGCGCCTTCGACGAGGGCACCC
GCGATCGTCCCTACGGCCACTGTTTGGTCGCGGGGATAAAGAAGTACCCG
AGCAAGGTCATCCGCAAGGACTCCGCCAAGAAGACGGCCAAGAAATCCAG
AGTGAAGGCCTTCGTGAAGCTCGTCAACTACCAGCACCTGATGCCCACCC
GGTACACCCTGGATGTGGATCTCAAGGACGTCGTCAACGTCGAGTCTTTG
CAGACCAAGGATAAGAAGGTCACTGCATTGAAGGAGGTGAAGAAGCGGTT
CGAGGAGCGGTTCAAGACCGGGAAAAACAGGTGGTTCTTCACCAAGCTCA
GGTTCTGAGAAGGGAGATTCAACAGCSCCGTATGGGAAATGGGGTCTGAT
TTCCCCACTGTGTTTTTTTTTTCAAGTTAAAGTTTTAATTTTGGAATTAA
ATGGATGAGACCTTTTTTGGATTTATGGATTAATGTTTAGCTAAACAATT
AGAGTTTGCTGTTATTGAGATATTTAATTTGTGGCATTCCTTGTTATGCT
ATGTTTATCTGCGATTTTAGACCAGCATTGCTMTTCTGTGTTGATTGAAA
TGTTTATTTCTTGCAATTACTTTGTCAATTTTATTTCGGGATTCATAGAG
ATTGGATTTGAGTTTTAGGTTATTTTGAGCTGCTAGATGTGCTCTGTCGA
TTGCCTAGTTGCAAAGCGAAATTTTGTTTTGCACCGATGTTCTGCTTTTG
GCATTTGAACCATGTTGTTTCGGTTTGATATGATTGAATTGTATGTTGTG
GCTTCTTGTTTGTCAATATCATTGTCGGTTGATAAAATCTTAACTGATGT
TTGGTGTTTGTCAATATCATTGTCGGTTATAAAATCTTCGCTGATGGGTG
TCTTGAGTTTTATGGTTGTGCTTGTGGTAAAATTAGGGTTCAAGTTAGAT
AGGACCTCAAACTTSGGACTTTATYGAGTAGACATTGTTTATCATTTCAG
CATGATGTGTTGAATTGAGTCATCAACTGGTGGCTGGTGATCAAATGACT
TTGGTGTCAAAATACAGACGCGAATGAAGTTGATGTTTGTTTTCGGTTGT
AACTTATAATCATGTGGCTCTGCTTGTTTTGTGTTTATCATGAAAGGTTT
CGATGCTAAGCCGATGTAGCATTGTATGGATTGATTTGGTAGTGTGAATT
TTTTGTTGCAAACATTTCCATGCCAACTCTTTCATAGATGATTTTCAATT
TTTCATGTGTGGGCAAGTACAGTATTTGTTCKYAGGCGTRATCAGGTAAT
GTGAGGTTTAATCTATTTCACTCGTTTCTTAGAACGGGTTTCTGACATTT
GCTACATGCGTTGATATGTCATAGACTTGTATCATTGGATTCAAAACTCC
GAGAGAAGTCTCGCTTTCATTTTGATGTCGAAAATTATGCAATTTGGATT
TGAACTCCGAGAGAAGTCTTGTTTTCACTCGTTTTCTCATGCACCCTCCA
GTTTCTGTAACCCTTGATTTGCTTTGATTCTCTGTTGATTCATCCAMTTC
GAAGGCACTGGAGGGGTTCAGTGGAAGAAAGTCGTGTGTGGGGAAATCAC
TTCCCATCTAATGAAACTTTACAAATCTCAATAGAAGCCTTRGTGAATAT
CCTCTCTATCTATTCGTTAGATGCATTCAAATTCACAAAGCACAATCCTT
ATCTCCAAATTTCCAAGCCGAACCCTTCTAAATATAAAACATACTTCAAA
CAGACTTCCATTGACGAGCAACTCCGGTTCCCTGCATGTTTAAGTGTGCG
CTGCTCCATGTCACCACGGCCTTGGCGCTCCGCCACTTGACCACCGGAAG
TAGAGAATCCTTCTGTACCAGTTGAAGAGCCAACCACCCCTATCGTACAA
CACTCAGTTTATTCTTTTTGATGGCCACTTGCTCAGTTTGCTCATTTGAC
GTTTGAATTTTGTAAATTAAAAAAAAGAAGCCATTTAGTATTACGGTCTA
GTGATATTCTTCTTCACATGTAAGTGAGAGGTTTTATATTCGATTGTTGT
CAATGGCGCAAATTTGAACCATATTATTACTAGCACATTGTGAAGCTTAA
CCTATTCTCTCATATTTTTAGTGCAGATAATATTGTTTATTCAGAAAAAA
ACAAAATCAGAAAAGAAAGAAAAACGATGAAGTCCAACTAAGCGTCCAAG
GTAGTACAGCTTGCAAAGCCGCCATCTAAAGTTCCAAAAGTTTGAGAATT
TTGAATGGTCTAGATGTTTGCATACAACCATACAAACAATATTCAAATCT
CCTCTCTCTCTCTCTCTCAACATAAAGTTAACAATCCACACAAAGACAAA
CACTCCCCCTAAACATCGTCCCGAGAATCCAAAGATGATGCAATTGCACC
ATTAATCAACTTATCAACCCTTAACTTATTCATTTAAATCCACAATCAAC
CCACCCTTATTCTATATTTTCCCTAATCCCCCAACACAACAAACGGACTT
AACGACAACGCCTAAACGGAGTACTTAACCAGGACGATTTCCCCACACGT
GTCAACTCCTCACCCCCCACACGTTCGGGAAATTTTTTTTTCATTGTGCT
ATAACCTACCTCGGGTGACCAAGTTTTAATATAATAAGTGACGGAATTTT
TTTTTCAAGCATCTAACTAGTTGTATTATAATGCTTTAAATTTTTCAGTG
TACCGAAAATACGGATTAGCACATTAAAAAATCTCTCCACRTGCTAGCAG
CTATTAGYGAAWTTTTTTTCATTGTATCGAAAATACGGTTTGACACATAA
TTTGTAATACAAGTGGCTGAAATTTTTATCAAGCCACTATGGGCTGGTTT
GATATTATTGTGCTTTGAAAAAAAACTGCTTCTGTTGTGCTGTGAGAATA
AGCAGCTGTGAAATMAAACAGTAGATTGTTTGGTAAATTTTTTTGTAAAA
GTGCTTTTGAAAAAAAAAAAGCAATATTATAGTGTTTGATAAATTTTTAT
GTAAAACAGATGTGAAAAAAAAACTAGTTTTTCAAAGCTRAATTTTGCAA
CTTTGTATTTTTAACTTTTTTTTAAKCTTTTTTTTCAGAATCATTTCAGT
ACTAAATCAGCACTATGTGTTAAGAATCTTATGGTATCCATTTGTCAGAA
TGAAAAATCTCTCCAATCGCCTCCCCMCCCTAAAGTTAACAGACTTTCTG
TTTCATTTCCTGTAATTTCTCTCACTCTCTCGCACTCTCTCTCCCTCTCT
CTCTCTAAACAGCTTTCTCTCTCTACTTTCTCTCTCTACTTTCTCTCCTC
CCTCTCTCTCTGACAAAGCTTTCTGCAGAACTCTCTGTACGGGCGTTTGG
TTGTCTTTCTCGCTTTTCTTTGTCTCTTTCCGCTCGAAAGCTTCCGAGCT
TTTTATATTCTCCCCACACTTCCTCCTTCCTCCTTCCTCCTTCTCCTCTA
CCAGTCATGCTTCAGAGCTTAATTCCTCAATCCCCGATCGCCGCCGCCAA
CCCTAACATTAACAACCCTACCTCCTCCTCCTCCTCCTCCATGAAGACCA
AGCGCGTTGACCGCGACCTCGCTGGCAGTGGAAGCGGCGATTCCGACGCT
GAAGACCCCTCCTTCACCAAGCGCCTCAGTTCCGGCCGAAACTTCCGTGA
ACAAACCGCAGACGATCGTGATACCGAAACGGTGGAGGAGGGCGAGTCGG
CCGGACTCAGACTGTTGGGGCTCCTGCTACAATGCGCCGAGTGCGTCGCC
ATGGACAAACTTGACGACGCCAGCGACCTGTTACCGGAGATCGCGGAGCT
ATCATCGCCTTTCGGGTCGTCGCCGGAGCGAATCGGCGCGTACTTCGCGC
ACGCACTGCAGACGCGCGTGGTCAGCTCCTGCTTAGGTACCTACTCACCG
CTTACCACCAAAACCCTAACGCTCGCTCAGTCGCAGCGGATCTTCAACGC
GCTCCAATCCTACAACTCCATCAGTCCGCTAGTCAAATTCTCTCACTTCA
CGTCCAATCAGGCGATTTTCCAGGCGCTGGACGGCGAGGATCACATCCAC
GTCATCGATTTGGATATAATGCAAGGCCTCCAGTGGCCAGGATTGTTCCA
CATCCTAGCCTCGCGGACGAAGAAGATCCGGTCAATGCGGATAACCGGGT
TCGGGTCCTCGTCGGAGCTCCTCGAGTCGACGGGGCGGAGACTCGCCGAT
TTCGCGAGCTCGCTCGGCCTCCCCTTCGAGTTCCAGCCGCTGGAGGGCAA
AATCGGGAGCATAACCGAGCTGAATCAACTCGGAATCAAACCGAGCGAGG
CCACCGTGATCCACTGGATGCACCATTGCTTGTACGACGTCACCGGCAGC
GATTTGGCAGCGCTGAGGTTGCTGGGCTCTCTGAGACCGAAGCTGATCAC
GATCGCCGAACAGGATTTGAGCCACAGCGGCAGCTTCTTGGGAAGGTTCG
TGGAGGCCTTGCATTACTACAGCGCGTTGTTTGATGCGCTCGGGGACGGA
CTGGGCGCGGACAGCCTGGAGAGGCATATGGTGGAGCAGCAGCTGTTCGG
CTGCGAGATTAGGAACATCCTCGCGGTGGGCGGGCCGAAGAGGACCGGAG
AGGTGAAGCTGGAGAGGTGGGGGGATGAGCTGAAGCGGGTCGGRTTTCGG
GGCGTTTCGCTTGGCGGGAACCCGGCAGCGCAGGCGAGCTTGCTGCTGGG
GATGTTTCCGTGGAAGGGGTACACCTTGGTGGAGGAGAATGGGTGCTTGA
AGTTGGGTTGGAAGGACCTGTCGTTGCTCACAGCCTCTGCCTGGCAGCCG
TTGGATTGA

Coding sequence (CDS) from alignment at MDC001358.428:12474..17332-

>MDP0000269044 ID=MDP0000269044; Name=MDP0000269044; organism=Malus x domestica; type=CDS; length=1926bp; location=Sequence derived from: MDC001358.428:12474..17332- (Malus x domestica
ATGGTGAAGTTTCTGAAGCCAAACAAGGCGGTGATCAACCTCCAGGGCCG
CTACGCCGGGCGCAAGGCCGTCATTGTTCGCGCCTTCGACGAGGGCACCC
GCGATCGTCCCTACGGCCACTGTTTGGTCGCGGGGATAAAGAAGTACCCG
AGCAAGGTCATCCGCAAGGACTCCGCCAAGAAGACGGCCAAGAAATCCAG
AGTGAAGGCCTTCGTGAAGCTCGTCAACTACCAGCACCTGATGCCCACCC
GGTACACCCTGGATGTGGATCTCAAGGACGTCGTCAACGTCGAGTCTTTG
CAGACCAAGGATAAGAAGGTCACTGCATTGAAGGAGGTGAAGAAGCGGTT
CGAGGAGCGGTTCAAGACCGGGAAAAACAGGTGGTTCTTCACCAAGCTCA
GTACTAAATCAGCACTATGTGTTAAGAATCTTATGCTTTCTGCAGAACTC
TCTGTACGGGCGTTTGGTTGTCTTTCTCGCTTTTCTTTGTCTCTTTCCGC
TCGAAAGCTTCCGAGCTTTTTATATTCTCCCCACACTTCCTCCTTCCTCC
TTCCTCCTTCTCCTCTACCAGTCATGCTTCAGAGCTTAATTCCTCAATCC
CCGATCGCCGCCGCCAACCCTAACATTAACAACCCTACCTCCTCCTCCTC
CTCCTCCATGAAGACCAAGCGCGTTGACCGCGACCTCGCTGGCAGTGGAA
GCGGCGATTCCGACGCTGAAGACCCCTCCTTCACCAAGCGCCTCAGTTCC
GGCCGAAACTTCCGTGAACAAACCGCAGACGATCGTGATACCGAAACGGT
GGAGGAGGGCGAGTCGGCCGGACTCAGACTGTTGGGGCTCCTGCTACAAT
GCGCCGAGTGCGTCGCCATGGACAAACTTGACGACGCCAGCGACCTGTTA
CCGGAGATCGCGGAGCTATCATCGCCTTTCGGGTCGTCGCCGGAGCGAAT
CGGCGCGTACTTCGCGCACGCACTGCAGACGCGCGTGGTCAGCTCCTGCT
TAGGTACCTACTCACCGCTTACCACCAAAACCCTAACGCTCGCTCAGTCG
CAGCGGATCTTCAACGCGCTCCAATCCTACAACTCCATCAGTCCGCTAGT
CAAATTCTCTCACTTCACGTCCAATCAGGCGATTTTCCAGGCGCTGGACG
GCGAGGATCACATCCACGTCATCGATTTGGATATAATGCAAGGCCTCCAG
TGGCCAGGATTGTTCCACATCCTAGCCTCGCGGACGAAGAAGATCCGGTC
AATGCGGATAACCGGGTTCGGGTCCTCGTCGGAGCTCCTCGAGTCGACGG
GGCGGAGACTCGCCGATTTCGCGAGCTCGCTCGGCCTCCCCTTCGAGTTC
CAGCCGCTGGAGGGCAAAATCGGGAGCATAACCGAGCTGAATCAACTCGG
AATCAAACCGAGCGAGGCCACCGTGATCCACTGGATGCACCATTGCTTGT
ACGACGTCACCGGCAGCGATTTGGCAGCGCTGAGGTTGCTGGGCTCTCTG
AGACCGAAGCTGATCACGATCGCCGAACAGGATTTGAGCCACAGCGGCAG
CTTCTTGGGAAGGTTCGTGGAGGCCTTGCATTACTACAGCGCGTTGTTTG
ATGCGCTCGGGGACGGACTGGGCGCGGACAGCCTGGAGAGGCATATGGTG
GAGCAGCAGCTGTTCGGCTGCGAGATTAGGAACATCCTCGCGGTGGGCGG
GCCGAAGAGGACCGGAGAGGTGAAGCTGGAGAGGTGGGGGGATGAGCTGA
AGCGGGTCGGRTTTCGGGGCGTTTCGCTTGGCGGGAACCCGGCAGCGCAG
GCGAGCTTGCTGCTGGGGATGTTTCCGTGGAAGGGGTACACCTTGGTGGA
GGAGAATGGGTGCTTGAAGTTGGGTTGGAAGGACCTGTCGTTGCTCACAG
CCTCTGCCTGGCAGCCGTTGGATTGA

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR001141	Ribosomal_eL27
IPR005202	TF_GRAS
IPR014722	Rib_uL2_dom2

Vocabulary: **Molecular Function**
Term	Definition
GO:0003735	structural constituent of ribosome

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular anatomical structure
GO:0005840	ribosome

Vocabulary: **Biological Process**
Term	Definition
GO:0006412	translation